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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs3775961 chr4:110742381 G/C 0.000137 480 16.57 15.4 14.47 KM Plot
THCA rs3778347 chr6:7872553 A/G 5.14E-9 486 15.83 16.87 12.07 KM Plot
THCA rs3789298 chr9:118993349 G/A 0.000246 484 16.13 14.68 9.65 KM Plot
THCA rs3792270 chr2:241531575 A/G 1.97E-11 485 15.9 15.42 19.27 KM Plot
THCA rs3794045 chr11:62602345 G/C 7.89E-5 490 16.23 14.17 14.27 KM Plot
THCA rs3794046 chr11:62602481 A/G 7.55E-5 490 16.22 14.33 14.27 KM Plot
THCA rs3794047 chr11:62609329 C/T 7.79E-5 485 16.13 14.48 14.27 KM Plot
THCA rs37954 chr7:7999416 A/G 3.25E-6 490 25.13 20.27 14.93 KM Plot
THCA rs3797797 chr5:96316470 A/G 3.52E-6 486 15.83 17.03 17.7 KM Plot
THCA rs3802924 chr11:133827733 A/C 3.12E-8 476 16.3 15.33 17.83 KM Plot
THCA rs3813347 chr6:133119778 G/A 7.17E-5 486 15.9 15 17.85 KM Plot
THCA rs3815019 chr16:20916286 G/A 4.22E-10 488 15.93 15 14.3 KM Plot
THCA rs3815840 chr2:86302103 A/G 6.42E-7 485 17.77 15.82 15.93 KM Plot
THCA rs3818128 chr6:153323945 G/T 4.33E-5 489 15.2 17.83 10.45 KM Plot
THCA rs3818807 chr1:156909303 T/A 5.16E-7 489 16.67 14.93 11.3 KM Plot